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Parallel subgenome common carp

WebSep 22, 2024 · To determine the genetic background of the allotetraploid lineage of goldfish (♀) and common carp (♂), we identified 100 chromosomes in the intergeneric F 1 and 200 chromosomes in the allotetraploid F 22 and F 24 based on metaphase chromosome assays of cultured kidney cells. WebDec 4, 2024 · The common carp is a representative polyploidy species of the Cyprininae, which includes diploids, tetraploids, and higher polyploids. The common carp is widely …

The Promoter SNPs Were Associated with Both the Contents of …

WebMay 27, 2024 · The ancient WGD within Cyprininae was identified via phylogenetic analyses of genome-wide markers, which integrated subgenomes M and P. Analyses compared both subgenomes of goldfish, common carp, and golden-line barbel ( Sinocyclocheilus grahami) to zebrafish and grass carp. WebSep 23, 2024 · Parallel subgenome structure and divergent expression evolution of allotetraploid common carp and goldfish. Nat Genet 53, 1493–1503. Article CAS PubMed PubMed Central Google Scholar simulation pour prime d\u0027activité https://jdmichaelsrecruiting.com

The allotetraploid origin and asymmetrical genome …

WebSep 30, 2024 · We found evidence for parallel subgenome structure evolution and versatile expression divergence processes in these tetraploids. Resequencing 93 individuals uncovered the geographical genome... WebOct 11, 2024 · Common carp (Cyprinus carpio) is an allotetraploid species derived from recent whole genome duplication and provides a model to study polyploid genome evolution in vertebrates.Here, we generate three chromosome-level reference genomes of C. carpio and compare to related diploid Cyprinid genomes. We identify a Barbinae lineage as … WebSep 21, 2014 · This study on the C. carpio genome provides a valuable resource for the molecular-guided breeding and genetic improvement of the common carp. Results … paul un si grand soleil

Population analysis of three common carp strains a, Maximum …

Category:[PDF] Parallel subgenome structure and divergent …

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Parallel subgenome common carp

FAO: Common carp home - Food and Agriculture Organization

WebSix pSNPs associated with the contents of PUFAs in common carp were identified, including one elovl5a pSNP, one elvl5b p SNP, and four fads2b pSNPS, which were predicted in the locations of transcriptional factor binding sites. The allo-tetraploid common carp encodes two duplicated fads2 genes (fads2a and fads2b) and two duplicated elovl5 … WebSep 1, 2024 · Parallel subgenome structure evolution in the allo-tetraploids was featured with equivalent chromosome components, higher protein identities, similar transposon divergence and contents, homoeologous exchanges, better synteny level, strong sequence compensation and symmetric purifying selection.

Parallel subgenome common carp

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WebGoldfish (Carassius auratus) were domesticated in ancient China from crucian carp (both are still considered the same species) (1–3), which is one of the most important farmed fish, with global aquaculture production of 3.096 million tons of crucian carp in 2024 ().The appearance of red scales on normally gray or silver crucian carp was first recorded … WebDec 1, 2024 · Common carp (Cyprinus carpio), with the characteristics of strong adaptability, excellent reproductive ability, and rich nutritional value, has been reared in Asia for more than 2 000 years...

WebMar 18, 2024 · The species-specific whole genome duplication and parallel subgenome evolution in common carp generated two homoeologues of fads2 (fads2a and fads2b) … WebMar 18, 2024 · The allo-tetraploid common carp, one widely cultured food fish, is able to produce poly-unsaturated fatty acids (PUFAs). The genetic markers on the PUFA contents for breeding was limited. The polymorphisms in elovl5a and elovl5b, the rate-limiting enzymes in the PUFA biosynthesis, have not been investigated yet.

WebSep 30, 2024 · In the present study, we report an improved genome assembly of allo-tetraploid common carp, an updated genome annotation of allo-tetraploid goldfish and … WebParallel subgenome structure and divergent expression evolution of allo-tetraploid common carp and goldfish. Nature Genetics 2024-10-30 ... (BMP4) expressions in muscles of tilapia and common carp indicate that BMP4 plays a role in the intermuscular bone distribution in a dose-dependent manner. Gene Expression Patterns 2024 Journal article

WebAquaculture production of common carp increases parallel to the increase of global aquaculture production of freshwater fishes. According to FAO (FIGIS, 2013), production of freshwater fishes was 31 839 573 tonnes in 2005, and increased to 45 335 385 tonnes by 2011 (an increase of more than 42 percent). During these years, the contribution of ...

WebOct 1, 2024 · Parallel subgenome structure evolution in the allo-tetraploids was featured with equivalent chromosome components, higher protein identities, similar transposon … simulation perte de chargesimulation pret etudiant cmbWebDec 29, 2024 · Common carp ( Cyprinus carpio ) is an allotetraploid Cyprinid species derived from recent whole genome duplication and provides an excellent model system for studying polyploid genome evolution in vertebrates. To explore the origins and consequences of tetraploidy in C. carpio , we generated three chromosome-level new … paulus restaurante odivelasWebAsymmetric subgenome evolution has been observed in domesticated plants 15,16,19,20 , African clawed frog (Xenopus laevis) 18 , and common carp (Cyprinus carpio) 21, 22 . ... Single-cell... paul vichyWebOct 11, 2024 · Common carp (Cyprinus carpio) is an allotetraploid species derived from recent whole genome duplication and provides a model to study polyploid genome … paul vernon fitchieWebSep 30, 2024 · In the present study, we report an improved genome assembly of allo-tetraploid common carp, an updated genome annotation of allo-tetraploid goldfish and the chromosome-scale assemblies of a progenitor-like diploid Puntius tetrazona and an outgroup diploid Paracanthobrama guichenoti. simulation prêt hypothécaire crelanWebParallel subgenome structure evolution in the allo-tetraploids was featured with equivalent chromosome components, higher protein identities, similar transposon divergence and contents, homoeologous exchanges, better synteny level, strong sequence compensation and symmetric purifying selection. ... Parallel subgenome structure and divergent ... paul veland ennis mt